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Advanced Diagnostic & Surveillance Systems for Epidemic Intelligence.

A 7-day strategic intensive equipping public health institutions across sub-Saharan Africa with the diagnostic, analytical, and operational capabilities to detect outbreaks earlier — and respond faster, with confidence.

Duration
7 days
Cohort
Sept 2026
Format
Hybrid
The need

A continent of 1.3 billion. Surveillance designed for far fewer.

Africa carries roughly 25% of the global disease burden but holds less than 3% of the world's healthcare workforce. When the next outbreak emerges — and it will — the speed of national diagnostic and surveillance infrastructure is the difference between a contained event and a continental crisis.

~70%
of African nations lack genomic sequencing capacity at sub-national level
Africa CDC, 2024
21days
average detection-to-confirmation lag for outbreak pathogens in Nigeria
NCDC SitRep avg.
3×
cost differential between containing an outbreak vs. a regional epidemic
WHO H. Emergencies
2x
predicted increase in zoonotic spillover events across West Africa by 2030
Lancet Planetary, '23
01

Fragmented surveillance pipelines.

State epidemiology units, federal labs, and tertiary hospitals operate on disconnected systems. Critical signals — case reports, lab results, mortality data — sit in silos for days before consolidation.

02

Workforce capability gap.

Many surveillance officers are clinically trained but lack formal preparation in outbreak analytics, modern molecular diagnostics, or digital reporting platforms. Existing FETP programmes are competitive and over-subscribed.

03

Diagnostic infrastructure underutilisation.

Equipment procured under emergency funding (PCR platforms, sequencers, BSL-2 cabinets) sits idle or single-use because institutions lack workflow design, QA frameworks, and trained operators.

04

Policy-to-operations translation deficit.

National strategies (Africa CDC New Public Health Order, NCDC Strategy 2023-27) exist on paper. State-level operational adoption — with measurable surveillance KPIs — remains the missing layer.

Our solution

A 7-day programme designed to close the gap at institutional scale.

ACEIHS partnered with practitioners from NCDC, Africa CDC RCC West, NIMR, and AFENET to design a curriculum that moves beyond theory — combining classroom instruction, wet-lab work, simulation exercises, and a capstone tied to each participant institution's real surveillance problem.

Day 01 · Foundations
01
Outbreak intelligence in the African context.
  • Landscape of sub-Saharan public health emergencies (2014–2025)
  • Africa CDC New Public Health Order & the IHR (2005)
  • Zoonotic spillover, climate drivers, urbanisation pressure
→ Institutional baseline self-assessment
Day 02 · Diagnostics
02
Modern diagnostic platforms & sample workflows.
  • RT-PCR, isothermal amplification, antigen rapid tests
  • Sample-to-result turnaround optimisation
  • BSL-2 wet-lab session: triage & safe handling
→ Hands-on bench session at partner lab
Day 03 · Genomics
03
Genomic surveillance & pathogen sequencing.
  • Nanopore vs. Illumina workflows for outbreak settings
  • Bioinformatics primer (Nextstrain, Pangolin, NextClade)
  • Variant calling & reporting to GISAID / Africa Pathogen Genomics Initiative
→ Simulated variant assignment exercise
Day 04 · Surveillance
04
IDSR, event-based & indicator-based systems.
  • Designing notifiable disease surveillance at state level
  • Community event-based surveillance (CEBS) protocols
  • Cross-border & one-health integration
→ Surveillance flow design for participant LGA
Day 05 · Analytics
05
Outbreak analytics & data visualisation.
  • Epi-curve construction, Rt estimation, hotspot detection
  • DHIS2, EpiInfo, Surveillance Outbreak Response Management (SORMAS)
  • Building decision-grade dashboards for principals
→ Live dashboard built from open NCDC data
Day 06 · Simulation
06
Tabletop & field simulation exercise.
  • Multi-state Lassa fever outbreak scenario
  • Incident command, risk communication, resource mobilisation
  • After-action review methodology
→ Joint AAR report with mentor sign-off
Day 07 · Capstone
07
Institutional capstone & commitment plan.
  • Each participant defends a surveillance improvement plan
  • Faculty + peer review against ACEIHS Maturity Framework
  • 90-day implementation roadmap with KPIs
→ Signed institutional commitment letter
Post-programme
Alumni network & 6-month mentorship.
  • Quarterly check-ins with assigned faculty mentor
  • Access to ACEIHS expert directory & resource library
  • Invitation to annual Health Security Summit
→ Long-term capability building, not a one-off course
Methodology

How we actually teach.

Case-based learning

Every module starts with a real outbreak case study, dissected with the responding officers in the room.

Wet-lab & simulation

Hands-on bench work and full-day tabletop exercises rehearse the muscle memory institutions need under pressure.

Mentor pods

Cohorts split into mentored pods of 6, each led by a senior epidemiologist or laboratory specialist.

Measurement first

Pre- and post-assessments tied to the ACEIHS Maturity Framework so institutions can prove the change.

Eligible institutions

Built for the institutions holding the front line.

Three institutional tracks, each with tailored curriculum emphasis. We accept up to 36 participants per cohort with a strict mix to ensure cross-institutional learning. Sponsoring institutions may nominate up to 3 candidates each.

Track A

Government & agencies

National and regional public health bodies responsible for setting policy and coordinating outbreak response.

  • Nigeria Centre for Disease Control (NCDC)
  • Federal & State Ministries of Health
  • Africa CDC Regional Coordinating Centres
  • West African Health Organisation (WAHO)
  • National Primary Health Care Development Agency
  • State Epidemiology Units
Track B

Research & academia

Tertiary hospitals, reference laboratories, and academic public health institutions running diagnostics & research.

  • Nigerian Institute of Medical Research (NIMR)
  • Federal Tertiary & Teaching Hospitals
  • State University Teaching Hospitals
  • National Reference Laboratories
  • Schools of Public Health
  • Veterinary & One-Health institutes
Track C

NGOs & partners

Implementing partners and development organisations supporting national surveillance & diagnostic capacity.

  • African Field Epidemiology Network (AFENET)
  • Management Sciences for Health (MSH)
  • Resolve to Save Lives implementing partners
  • Bilateral programme partners (CDC, USAID, FCDO)
  • Faith-based health networks & mission hospitals
  • Private diagnostic laboratory chains
Outcomes

What participants — and their institutions — walk away with.

Every outcome is mapped to the ACEIHS Maturity Framework and the Africa CDC competency standards for public health professionals.

Operate modern diagnostic platforms with confidenceRT-PCR, isothermal, antigen, sequencing — including QA/QC discipline
Design state-level surveillance & reporting flowsFrom CEBS at LGA tier through to federal SitRep contributions
Build decision-grade analytics & dashboardsReal-time visibility for principals, leveraging DHIS2/SORMAS
Lead institutional outbreak responseIncident command, risk communication, after-action review
Drive a 90-day institutional improvement planCo-signed capstone with measurable surveillance KPIs
Earn CMD-recognised certificationContinuing Medical Development credits with national recognition
— ACEIHS · Certificate of Completion —

This is to certify that

[ Participant Name ]

has successfully completed the Advanced Diagnostic & Surveillance Systems Programme delivered by the African Centre for Epidemic Intelligence & Health Security, in partnership with national public health authorities.

Princess Uduak Friday
Executive Director · ACEIHS
ADS-2026Cohort 01
Logistics

Investment, dates & what's included.

Cohort dates14 – 20 September 2026Application window closes 31 July 2026
VenueAbuja, NigeriaHybrid sessions available for international participants
Cohort sizeUp to 36 participantsMixed across the three institutional tracks
LanguageEnglishTranslation support available on request
InvestmentOn enquiryConcessional rates for state institutions; full sponsorship places available for partner-nominated candidates
AccreditationCMD-recognisedContinuing Medical Development credits applicable for licensed clinicians

Fully inclusive.

Once your institution is enrolled, every operational detail is handled by ACEIHS so participants can focus on learning.

  • All instructional materials, lab consumables & software access
  • Daily working lunch & refreshments
  • Curated reading library & ACEIHS Surveillance Toolkit
  • 6 months of post-programme mentorship
  • Alumni invitation to the annual Health Security Summit
Common questions

Before you apply.

If your question isn't answered here, write to [email protected] — we'll respond within 48 hours.

Who is the ideal participant?+

Mid-career professionals (5–15 years' experience) in public health, laboratory science, epidemiology, or clinical medicine, holding a leadership or technical role within an eligible institution. We particularly welcome state surveillance officers, laboratory directors, and emergency operations leads.

Are international participants welcome?+

Yes. While the curriculum is anchored in Nigerian and West African contexts, participants from across sub-Saharan Africa, the Sahel, and East Africa are welcome. Visa support letters are issued on confirmed enrolment. Hybrid attendance is available for participants unable to travel.

How is the programme funded?+

Through a blend of institutional fees, partner sponsorships, and dedicated grants. Concessional rates apply to state-level institutions, and a fixed number of fully sponsored places are reserved for nominees from partner agencies including NCDC, Africa CDC RCC West, and AFENET.

What is the application process?+

(1) Register interest via the form below, (2) receive an application pack within 5 working days, (3) submit nomination letter from sponsoring institution + CV, (4) shortlisted candidates complete a brief technical pre-assessment, (5) final cohort confirmed 6 weeks before commencement.

Can my institution sponsor multiple candidates?+

Yes — institutions may nominate up to three candidates per cohort, with a recommended mix of laboratory, surveillance, and operational leadership roles to maximise post-programme implementation impact.

Is there post-programme support?+

Yes. Every participant is paired with a faculty mentor for 6 months following the programme, with structured quarterly check-ins to support implementation of the institutional capstone plan. All alumni gain permanent access to the ACEIHS expert network and resource library.

Register your interest

Reserve a place for your institution.

Submit your details below and our programmes team will send the application pack and confirm whether sponsored places remain in your track.

We respond within 48 hours · No obligation
Thank you. Your enquiry has been logged. The ACEIHS programmes team will follow up within 48 hours with the application pack and next steps. For urgent queries, contact [email protected].